Find identical files in one or more directory trees with the free sfk dupfind command for the Windows, Mac OS X and Linux command line.

sfk dupfind -dir anydir [-file .ext1 .ext2]

find and list duplicate files, just by file content,
independent from filename. searches for files with same
size and then compares contents by md5 checksums.

options
   -diffdirs    list only duplicates residing in different
                root directories. this option requires that
                you specify at least two dirs after -dir.
   -listorg     list all original filenames,
                leave out any duplicate filenames.
   -minsize=n   compare only files with size >= n.
                examples for n are:
                   5m = 5000000 bytes (5 mbytes)
                 100k =  100000 bytes (5 kbytes)
                   1M = 1048576 bytes (2<<20 bytes)
                9000b =    9000 bytes

command chaining
   - by default, this command passes the names
     of found duplicate files to the next command.

   - option -listorg does the opposite: it passes
     only original filenames, but no duplicates,
     to the next chain command.

NOTE:
   if identical files are found, the decision what is listed
   as "original" or "duplicate" is currently based on the
   order in the file system: the file found first is listed as
   "original". check carefully if this is what you think,
   before cleaning up any duplicates.

web reference
   http://stahlworks.com/sfk-dupfind

examples
   sfk dupfind .
      find all duplicates within the current directory tree.

   sfk dupfind -dir docs1 docs2 docs3
      find all dups across and within the given directories.

   sfk dupfind -diffdir -dir docs1 docs2 docs3
      find dups between docs1/docs2, docs2/docs3, docs1/docs3,
      but does NOT list dups within the same root directory.

   sfk dupfind docs .doc +del
      find all duplicate .doc files, within the docs
      directory tree, and delete them.

   sfk dupfind -listorg docs .doc +run "copy $file docs2"
      copy all .doc files from docs to docs2,
      but leave out any duplicate files.

   sfk dupfind -dir pic1 -dir pic2 -dir pic3
      find duplicates across three different directory trees.
      specifying multiple -dirs is also a way of influencing
      the result order; if a file is found both in pic1 and pic3,
      the file from pic1 will be listed as original, the other one
      as the duplicate.

   sfk sel -dir pic1 pic2 pic3 -file .jpg +dup -minsize=1m
      similar to the above, this example uses command chaining:
      list all .jpg files from the pic directories, then pass
      this to the dupfind command, also filtering by size.